RNAseq of New World lupins, sample LUP1202 - SRA

SRX1721967: RNAseq of New World lupins, sample LUP1202
1 ILLUMINA (Illumina HiSeq 2000) run: 11.1M spots, 2.2G bases, 1.4Gb downloads

Design: Total RNA was extracted from whole greenhouse grown seedlings and sequenced on Illumina HiSeq platform

Submitted by: University of Oxford

Study: Widespread adaptive evolution during repeated evolutionary radiations in New World lupins

Using RNAseq data we study adaptive evolution during rapid diversifiation of New World lupins.

Sample: New World Lupinus spp.

Library:

Name: LUP1202_1

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 11.1M spots, 2.2G bases, 1.4Gb

Run	# of Spots	# of Bases	Size	Published
SRR3423031	11,097,668	2.2G	1.4Gb	2016-08-02

Supplemental Content

DNA-binding protein REB1 [Saccharomyces cerevisiae S288C]
DNA-binding protein REB1 [Saccharomyces cerevisiae S288C]
gi|6319523|ref|NP_009605.1|

Protein
serine hydroxymethyltransferase, partial [Sulfurimonas sp. M70]
serine hydroxymethyltransferase, partial [Sulfurimonas sp. M70]
gi|1147708179|dbj|BAW98529.1|

Protein
cytochrome oxidase subunit I, partial (mitochondrion) [Anagrus erythroneurae]
cytochrome oxidase subunit I, partial (mitochondrion) [Anagrus erythroneurae]
gi|158905332|gb|ABW82479.1|

Protein
Metagenome-assembled genome: ERR4836928_bin.17_MetaWRAP_v1.1_MAG
Metagenome-assembled genome: ERR4836928_bin.17_MetaWRAP_v1.1_MAG

biosample
Metagenome-assembled genome: ERR4303147_bin.54_MetaWRAP_v1.1_MAG
Metagenome-assembled genome: ERR4303147_bin.54_MetaWRAP_v1.1_MAG

biosample

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